Fish lncrna database

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August undefined, 2024

WebSep 23, 2024 · Noncoding RNA–protein interaction data were firstly downloaded from the NPInter 2.0 database 67. lncRNA and protein sequences were extracted from the … WebMar 31, 2024 · To summarize, although fish have a significant number of independent expression profile data, there is a lack of systematic sorting of transcript information, …

Localization and abundance analysis of human lncRNAs at single …

WebApr 8, 2024 · In PC, by utilizing the GSE15471 and GSE16515 datasets and the Database for Annotation, Visualization, and Integrated Discovery (DAVID), Wang et al. conducted a functional enrichment analysis which demonstrated that the MMP9/ITGB1-miR-29b-3p-lncRNA HCP5 network was associated with the prognosis of PC . WebJan 8, 2024 · In the study of Jason E. Fish, lncRNA CCL2 regulated CCL2 expression in human vascular endothelial cells, which may contribute to the formation of atherogenesis [23]. However, there are rare studies on the biological function and molecular mechanism of CCL2 in gastric cancer. how to stay warm while swimming

LncExpDB: an expression database of human long non-coding …

WebIntroduction. LncExpDB is a comprehensive database for lncRNA expression. It covers expression profiles of lncRNA genes across various biological contexts, predicts potential functional lncRNAs and their interacting partners, and thus provides essential guidance on experimental design.. LncExpDB currently houses expression profiles of 101,293 high … WebLNCipedia is a public database for long non-coding RNA (lncRNA) sequence and annotation. The current release contains 127,802 transcripts and 56,946 genes. … WebNov 16, 2024 · In this update of NONCODE database, we collected high-confidence datasets of plant lncRNA and developed a pipeline to annotate lncRNAs in plants. The … how to stay warm outside

Long non‐coding RNAs influence the transcriptome in pulmonary …

RNA FISH Related Products LGC Biosearch Technologies

WebJan 1, 2024 · 2 State Key Laboratory of Developmental Biology of Freshwater Fish, School of Life Sciences, Hunan Normal University, Changsha, China. PMID ... we constructed … WebSearch for your lncRNAs of interest and press GO to obtain the plots. You can select at least 3 genes in both the search and reference inputs. If 3 are selected a high resolution screen is recommended. What is being displayed? LncATLAS displays the subcellular localisation for user-selected lncRNAs. react ripple effectWebMay 4, 2024 · In this study, we found that the expression of long noncoding RNA (lncRNA) negative regulator of antiviral response (NRAV) was reduced in RSV-infected patients, and overexpression of NRAV facilitated RSV production in vitro, suggesting that the reduction of NRAV in RSV infection was part of the host antiviral response. how to stay warm outdoors

"WebJan 29, 2015 · Here, we used single molecule RNA FISH in single cells to characterize the sub-cellular localization patterns and abundance of 61 lncRNAs across three human cell types. " - Fish lncrna database

Fish lncrna database

List of lncRNA databases. Download Table - ResearchGate

WebNov 18, 2024 · The lncRNA profiles of IPAH and donor groups were clearly distinct ... GRCh38.p12 according to the NCBI database). ... (FISH). PAXIP1-AS1 was expressed in the lung with abundance in α-smooth muscle actin-expressing cells (Figure 2C and supplementary material, ... WebSep 11, 2024 · This research will enrich the lncRNA database of teleost and contribute to a better understanding of the role of lncRNAs in the immune response of teleost. ... (3 …

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WebJan 16, 2024 · Non-alcoholic fatty liver disease (NAFLD) is one of the most prevalent chronic liver diseases worldwide with an unclear mechanism. Long non-coding RNAs (lncRNAs) have recently emerged as important regulatory molecules. To better understand NAFLD pathogenesis, lncRNA and messenger RNA (mRNA) microarrays were conducted in an … WebJan 16, 2024 · From Figs. 3D, 6,025 candidate lncRNAs were captured, including 3,729 lincRNAs (61.9%), 889 antisense lncRNAs (14.8%), 1129 intronic lncRNAs (18.7%) and 278 sense lncRNAs (4.6%).

WebJan 30, 2024 · Lnc2Catlas ( http://lnc2catlas.bioinfotech.org/) is an atlas of long noncoding RNAs (lncRNAs) associated with cancer risk. LncRNAs are a class of functional noncoding RNAs with lengths over 200 nt... WebNational Center for Biotechnology Information

WebAbout ZFLNC (Zebrafish LncRNA Database) There is emerging evidence that lncRNAs can be involved in various critical biological processes. Zebrafish is a full-developed model … WebSep 11, 2024 · This research will enrich the lncRNA database of teleost and contribute to a better understanding of the role of lncRNAs in the immune response of teleost. ... (3 biological duplicates at 5 time points) were used for later lncRNA-sequencing. The experimental fish were anesthetized with MS 222 at 100 mg/L before dissection. All …

WebJan 8, 2024 · LncRNADisease 2.0 documents more than 200 000 lncRNA-disease associations. We expect that this database will continue to serve as a valuable source for potential clinical application related to lncRNAs. LncRNADisease 2.0 is freely available at http://www.rnanut.net/lncrnadisease/. Publication types Research Support, Non-U.S. …

WebOct 5, 2024 · Long non-coding RNA Knowledgebase (lncRNAKB) is an integrated resource for exploring lncRNA biology in the context of tissue-specificity and disease association. A systematic integration of... how to stay warm in the snowWeb(A) The location of DGUOK-AS1 in cells by the lncATLAS database. (B) DGUOK-AS1 localization was analyzed via FISH analysis. (C) LncRNA DGUOK-AS1 levels in cytoplasm and nucleus of MES-1 and Calu-1 cells were detected by qRT-PCR (D) IGF2BP2 level in NSCLC (n = 25) and normal samples (n = 25) was examined via qRT-PCR. (E) The … how to stay warm while riding motorcycleWebOct 2, 2024 · This database will provide for a systematic S. scrofalncRNA classification and help investigators browse, search for and analyze lncRNAs as well as do blastsearches among human, mouse and pig lncRNAs. Thus, lncRNAnet should improve the understanding of the biological functions of lncRNA. The database is freely accessible … how to stay warm snow campingWebJan 8, 2024 · Based on comprehensive integration and stringent curation, LncExpDB currently houses expression profiles of 101 293 high-quality human lncRNA genes derived from 1977 samples of 337 biological conditions across nine biological contexts. react risk medicalWebApr 13, 2024 · To determine the need for in vivo experiments in mice, we studied whether there is a conserved lncRNA in mice that could regulate the PTBP1/CDKN1B axis. According to the Ensemble Database, a similar lncRNA, named Gm49317-201, exists in mice and has 179 bases identical to AC006064.4–201 (Supplementary Fig. 3A). … how to stay warm while sleepinghttp://bio-annotation.cn/lncrna2target/ how to stay wealthyWebNov 2, 2024 · The classification of lncRNAs. The six types of lncRNAs include sense lncRNAs A, orange, antisense lncRNAs (aslncRNAs) B, yellow, bidirectional lncRNAs C, light green, enhancer lncRNAs … how to stay warm while camping